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Schema
Citing CMDGA
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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
7
keratinocyte
6
endothelial cell of hepatic sinusoid
5
hepatocyte
4
mammary epithelial cell
4
pancreatic ductal cell
4
tracheal epithelial cell
3
bronchial epithelial cell
3
choroid plexus epithelial cell
3
endothelial cell
3
mammary gland epithelial cell
3
retinal pigment epithelial cell
2
aortic endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endothelial cell of umbilical vein
2
epithelial cell of prostate
2
foreskin keratinocyte
2
kidney epithelium
2
meso-epithelial cell
2
pulmonary artery endothelial cell
2
vein endothelial cell
1
corneal epithelium
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
intestinal epithelial cell
1
intestinal epithelium
1
pancreatic acinar cell
1
renal connecting tubule
Organ
5
epithelium
5
liver
Date released
3
August, 2021
2
February, 2021
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR954EQS
released
Annotation file set
: Histone modifications annotation of H3K4me3 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR931ARL
released
Annotation file set
: Histone modifications annotation of H3K4me1 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR523PSZ
released
Annotation file set
: Histone modifications annotation of H3K27ac ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR272SHL
released
Annotation file set
: Histone modifications annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687WXO
released
Annotation file set
: Binding sites annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP