Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
8
accessible chromatin
5
gene expression
4
histone modifications
2
chromatin state
2
target gene predictions
2
variant allelic effects
1
binding sites
1
candidate regulatory elements
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
endothelial cell
4
pancreatic delta cell
3
colon epithelial cell
3
keratinocyte
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
cortical cell of adrenal gland
2
endothelial cell of umbilical vein
2
hepatocyte
2
luminal epithelial cell of mammary gland
2
type II pneumocyte
1
EndoC_BH1
1
basal cell of epidermis
1
breast epithelium
1
cardiac endothelial cell
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epithelial cell of prostate
1
foveolar cell of stomach
1
granular cell of epidermis
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mesothelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
pancreatic polypeptide-secreting cell
1
paneth cell
1
parietal cell
1
peptic cell
1
respiratory goblet cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
Organ
2
epithelium
2
liver
Date released
1
May, 2021
1
November, 2021
Software used
2
abc
r
Lab
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
software_used.software.name!
r
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR943ZIF
released
Annotation file set
: Target gene predictions of Hepatocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR604IOP
released
Annotation file set
: enhancer-gene predicton of hepatocyte-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP