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Schema
Citing CMDGA
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Annotation type
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
15
epithelial cell of proximal tubule
13
glomerular endothelial cell
9
foreskin keratinocyte
8
keratinocyte
7
endothelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
hepatocyte
6
mammary epithelial cell
5
bronchial epithelial cell
5
endothelial cell of umbilical vein
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
dermis blood vessel endothelial cell
4
epithelial cell of prostate
4
esophagus squamous epithelium
4
pancreatic ductal cell
4
tracheal epithelial cell
3
S-shaped body
3
breast epithelium
3
choroid plexus epithelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
mammary gland epithelial cell
3
meso-epithelial cell
3
pulmonary artery endothelial cell
3
retinal pigment epithelial cell
2
dermis lymphatic vessel endothelial cell
2
kidney epithelium
2
kidney inner medulla collecting duct intercalated cell
2
lung microvascular endothelial cell
2
myoepithelial cell of mammary gland
2
pancreatic alpha cell
2
renal connecting tubule
2
renal vesicle
2
vein endothelial cell
1
amniotic epithelial cell
1
aortic endothelial cell
1
brain microvascular endothelial cell
1
cholangiocyte
1
corneal epithelium
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
epithelial cell of esophagus
1
intestinal epithelial cell
1
intestinal epithelium
1
iris pigment epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
non-pigmented ciliary epithelial cell
1
pancreatic acinar cell
1
pancreatic beta cell
1
proximal tubule
1
renal cortical epithelial cell
1
ureteric bud
Organ
3
epithelium
3
eye
Life stage
1
unknown
Date released
3
February, 2021
3
September, 2022
1
January, 2020
1
June, 2020
1
November, 2021
1
October, 2022
Software used
2
macs
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
ATAC-seq
Showing 3 of 3 results
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Download
FileSet
DSR884KLY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE retinal pigment epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR474DDE
released
Annotation file set
: Histone modifications annotation for Neural HRPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR315WHB
released
Annotation file set
: Binding sites annotation for Neural HRPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP