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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
1
bam
1
bed bed9
1
bed gappedPeak
1
xls
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
bronchial epithelial cell
8
epithelial cell of prostate
7
keratinocyte
6
dermis lymphatic vessel endothelial cell
5
lung microvascular endothelial cell
4
brain microvascular endothelial cell
4
choroid plexus epithelial cell
4
epithelial cell of esophagus
4
epithelial cell of proximal tubule
4
glomerular endothelial cell
4
iris pigment epithelial cell
4
kidney epithelial cell
4
non-pigmented ciliary epithelial cell
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
retinal pigment epithelial cell
3
aortic endothelial cell
3
colon epithelial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
hepatocyte
3
hepatocyte(AFP)
3
mammary gland epithelial cell
3
pancreatic ductal cell
2
dermis microvascular lymphatic vessel endothelial cell
1
amniotic epithelial cell
1
endothelial cell
1
mammary epithelial cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
Organ
5
epithelium
4
eye
1
pancreas
Life stage
5
adult
5
unknown
1
newborn
Date released
4
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR374SHC
released
Annotation file set
: Candidate regulatory elements for BSS01505 retinal pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR511UVN
released
Annotation file set
: Target gene predictions for BSS01505 retinal pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR856FNO
released
Annotation file set
: Chromatin states for BSS01505 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR055KAB
released
Annotation file set
: Accessible chromatin from snATAC-seq of beta cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR884KLY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE retinal pigment epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP