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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
8
bronchial epithelial cell
8
epithelial cell of prostate
7
keratinocyte
6
dermis lymphatic vessel endothelial cell
5
lung microvascular endothelial cell
4
brain microvascular endothelial cell
4
choroid plexus epithelial cell
4
epithelial cell of esophagus
4
epithelial cell of proximal tubule
4
glomerular endothelial cell
4
iris pigment epithelial cell
4
kidney epithelial cell
4
non-pigmented ciliary epithelial cell
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
retinal pigment epithelial cell
3
aortic endothelial cell
3
colon epithelial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
hepatocyte
3
hepatocyte(AFP)
3
mammary gland epithelial cell
3
pancreatic ductal cell
2
dermis microvascular lymphatic vessel endothelial cell
1
amniotic epithelial cell
1
endothelial cell
1
mammary epithelial cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
Organ
4
epithelium
4
eye
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR374SHC
released
Annotation file set
: Candidate regulatory elements for BSS01505 retinal pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR511UVN
released
Annotation file set
: Target gene predictions for BSS01505 retinal pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR856FNO
released
Annotation file set
: Chromatin states for BSS01505 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR884KLY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE retinal pigment epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP