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Schema
Citing CMDGA
Clear Filters
Annotation type
10
gene expression
6
accessible chromatin
2
binding sites
2
caQTL
2
variant allelic effects
1
eQTL
1
histone modifications
1
target gene predictions
Annotation Category
6
cis-regulatory elements
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
6
bed bed3+
4
bigWig
File set status
6
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Biosample term
20
pigmented layer of retina
8
EndoC_BH1
8
retinal pigment epithelial cell
7
hepatocyte
6
endothelial cell
6
pancreatic ductal cell
5
pancreatic beta cell
4
endothelial cell of hepatic sinusoid
4
pancreatic acinar cell
4
pancreatic alpha cell
3
glomerular visceral epithelial cell
3
pancreatic delta cell
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
pancreatic polypeptide-secreting cell
2
renal cortical epithelial cell
1
brain microvascular endothelial cell
1
breast epithelium
1
bronchial epithelial cell
1
club cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of lymphatic vessel
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
esophagus squamous epithelium
1
foreskin keratinocyte
1
glomerular epithelium
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
neuroendocrine cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pulmonary artery endothelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
tracheal epithelial cell
1
type B pancreatic cell
1
type I pneumocyte
1
type II pneumocyte
1
urothelial cell
Organ
6
epithelium
Life stage
2
adult
1
unknown
Date released
2
February, 2024
2
May, 2022
1
August, 2021
1
January, 2021
Software used
6
macs
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
1
Stephen Parker, UMich
Project
5
AMP
1
T1D
RFA
ENCODE3
3
AMP2
2
AMP
1
T1D
files.file_type!
bed gappedPeak
award.rfa!
ENCODE3
Showing 6 of 6 results
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Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR897TMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of endothelial cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR493PXL
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Endothelial cells
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR264NGG
released
Annotation file set
: Cell type chromatin broad peaks and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR579LZJ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of endothelial
Lab:
Kyle Gaulton, UCSD
Project:
T1D