Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
4
bed bed3+
3
bigWig
2
bigBed narrowPeak
1
tsv
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
13
pigmented layer of retina
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic delta cell
3
endothelial cell
3
pancreatic polypeptide-secreting cell
2
aortic endothelial cell
2
capillary endothelial cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
retinal pigment epithelial cell
1
club cell
1
endothelial cell of lymphatic vessel
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
neuroendocrine cell
1
pancreatic endothelial cell
1
renal intercalated cell
1
renal principal cell
1
type I pneumocyte
1
type II pneumocyte
Organ
3
epithelium
3
pancreas
Life stage
2
adult
Date released
2
February, 2024
1
January, 2021
Software used
2
macs
1
deltasvm
Lab
3
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
assembly!
GRCh38
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR550HPP
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of gamma
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR260PUK
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic gamma cell snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR614CXC
released
Annotation file set
: pancreatic gamma cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP