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Citing CMDGA
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Annotation type
13
gene expression
7
accessible chromatin
4
histone modifications
3
candidate regulatory elements
3
target gene predictions
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
5
endothelial cell of umbilical vein
4
foreskin keratinocyte
3
keratinocyte
3
mammary gland epithelial cell
2
breast epithelium
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of prostate
2
esophagus squamous epithelium
2
hepatocyte
2
kidney tubule cell
2
myoepithelial cell of mammary gland
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
non-pigmented ciliary epithelial cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
Organ
2
epithelium
2
liver
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
November, 2021
Showing 2 of 2 results
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Download
FileSet
DSR642PKA
released
Annotation file set
: Chromatin states for BSS00556 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607QDA
released
Annotation file set
: Chromatin states for BSS00554 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP