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Schema
Citing CMDGA
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Annotation type
14
gene expression
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
11
foreskin keratinocyte
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
5
breast epithelium
4
bronchial epithelial cell
4
epithelial cell of prostate
4
myoepithelial cell of mammary gland
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
HS-27A
2
HS-5
2
KMS-11
2
L1-S8
2
MG63
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
SJSA1
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
femur
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
stromal cell of bone marrow
1
L1-S8R
1
amniotic epithelial cell
1
arm bone
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
kidney capillary endothelial cell
1
leg bone
1
luminal epithelial cell of mammary gland
Organ
2
epithelium
2
kidney
0
bone element
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
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Download
FileSet
DSR225CIF
released
Annotation file set
: Candidate regulatory elements for BSS00387 glomerular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267ZHH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE glomerular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP