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Schema
Citing CMDGA
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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
29
brain
11
foreskin keratinocyte
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
layer of hippocampus
5
breast epithelium
5
caudate nucleus
5
substantia nigra
5
temporal lobe
4
SK-N-DZ
4
SK-N-SH
4
angular gyrus
4
bronchial epithelial cell
4
cingulate gyrus
4
epithelial cell of prostate
4
myoepithelial cell of mammary gland
3
cerebellum
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
A172
2
Ammon's horn
2
Brodmann (1909) area 46
2
Daoy
2
H54
2
M059J
2
SK-N-MC
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
frontal cortex
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
middle frontal area 46
2
middle frontal gyrus
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
putamen
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
1
BE(2)-C
1
BE2C
1
amniotic epithelial cell
1
brain pericyte
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
inferior parietal cortex
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
pons
Organ
3
epithelium
3
liver
0
brain
Life stage
2
embryonic
1
unknown
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR201DTC
released
Annotation file set
: Candidate regulatory elements for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR654OFJ
released
Annotation file set
: Candidate regulatory elements for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR731RPD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP