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Schema
Citing CMDGA
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Annotation type
14
gene expression
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
29
brain
11
foreskin keratinocyte
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
layer of hippocampus
5
breast epithelium
5
caudate nucleus
5
substantia nigra
5
temporal lobe
4
SK-N-DZ
4
SK-N-SH
4
angular gyrus
4
bronchial epithelial cell
4
cingulate gyrus
4
epithelial cell of prostate
4
myoepithelial cell of mammary gland
3
cerebellum
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
A172
2
Ammon's horn
2
Brodmann (1909) area 46
2
Daoy
2
H54
2
M059J
2
SK-N-MC
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
frontal cortex
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
middle frontal area 46
2
middle frontal gyrus
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
putamen
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
1
BE(2)-C
1
BE2C
1
amniotic epithelial cell
1
brain pericyte
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
inferior parietal cortex
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
pons
Organ
2
epithelium
2
kidney
0
brain
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
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Showing 2 of 2 results
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Download
FileSet
DSR225CIF
released
Annotation file set
: Candidate regulatory elements for BSS00387 glomerular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267ZHH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE glomerular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP