Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
18
accessible chromatin
11
target gene predictions
10
gene expression
6
candidate regulatory elements
5
chromatin state
4
binding sites
3
variant allelic effects
2
caQTL
1
eQTL
1
histone modifications
Annotation Category
3
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
enterocyte
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
hepatocyte
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
EndoC_BH1
1
Liver fetal (hepatocyte)
1
bronchial goblet cell
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of prostatic duct
1
mammary gland epithelial cell
1
mesothelial cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
renal cortical epithelial cell
1
thyroid follicular cell
1
type II pneumocyte
Organ
3
epithelium
1
blood vessel
1
vasculature
1
vein
0
extraembryonic component
Life stage
1
newborn
Date released
2
February, 2024
1
May, 2020
Software used
3
deltasvm
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR035TOY
released
Annotation file set
: Variant allelic effects annotation of Endothelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR772CSM
released
Annotation file set
: Variant allelic effects annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR088CRI
released
Annotation file set
: Variant allelic effects of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP