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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
12
bronchial epithelial cell
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
10
esophagus
6
epithelial cell of esophagus
4
femur
4
smooth muscle cell of the esophagus
3
arm bone
3
club cell
3
leg bone
1
bronchial goblet cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
Organ
3
bronchus
3
epithelium
0
esophagus
0
skeleton
Date released
2
November, 2021
1
April, 2020
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
2
ENCODE
1
LungMap
RFA
2
ENCODE3
1
LungMap2
Showing 3 of 3 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR905LLL
released
Annotation file set
: Target gene predictions of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE