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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
68
lung
62
A549
52
left lung
45
right lung
16
fibroblast of lung
16
upper lobe of left lung
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
10
esophagus
9
IMR-90
8
PC-9
7
WI38
7
type II pneumocyte
6
epithelial cell of esophagus
5
lung microvascular endothelial cell
4
NCI-H226 cell
4
NCI-H460 cell
4
smooth muscle cell of the esophagus
4
type I pneumocyte
1
NCI-H226
1
NCI-H460
1
endothelial cell of artery
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
lung neuroendocrine cell
Disease term
3
squamous cell carcinoma
Organ
4
lung
0
esophagus
Life stage
3
adult
Date released
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR141LHZ
released
Annotation file set
: Candidate regulatory elements for BSS01359 NCI-H226 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR683CJE
released
Annotation file set
: Target gene predictions for BSS01359 NCI-H226 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379SBY
released
Annotation file set
: Chromatin states for BSS01359 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR739JRN
released
Annotation file set
: Accessible chromatin annotation for Lung NCI-H226 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP