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Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
accessible chromatin
1
histone modifications
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
Annotation type Category
2
scRNA-seq
1
ATAC-seq
1
ChIP-seq
Available data
2
bed bed3+
1
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
41
islet of Langerhans
23
body of pancreas
21
pancreas
19
EndoC_BH1
15
endocrine pancreas
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
pancreatic ductal cell
10
esophagus
5
pancreatic beta cell
4
Panc1
4
epithelial cell of esophagus
4
pancreatic acinar cell
4
pancreatic alpha cell
3
8988T
3
HPDE6-E6E7
3
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
1
activated pancreatic stellate cell
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
pancreatic endocrine cell
1
pancreatic stellate cell
1
quiescent pancreatic stellate cell
Organ
4
epithelium
4
pancreas
0
esophagus
Life stage
1
adult
Date released
1
August, 2018
1
February, 2021
1
May, 2021
1
October, 2019
Software used
2
macs
2
r
Lab
8
Kyle Gaulton, UCSD
5
Bing Ren, UCSD
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR878FRU
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of pancreatic acinar cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR834YDU
released
Annotation file set
: Histone modifications annotation for Pancreas Pancreatic_acinar_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR639GZY
released
Annotation file set
: Pancreatic acinar cell accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR393GVO
released
Annotation file set
: pancreatic acinar cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP