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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
Annotation Category
5
cis-regulatory elements
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
45
placenta
16
trophoblast cell
12
chorionic villus
7
chorion membrane
7
fibroblast of villous mesenchyme
5
umbilical cord
3
amnion
2
HTR-8/Svneo
2
amnion mesenchymal stem cell
amniotic stem cell
2
chorion
2
epithelial cell of amnion
1
amniotic epithelial cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
trophoblast giant cell
Organ
5
extraembryonic component
Life stage
3
embryonic
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
2
macs
1
chromhmm
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_category!
Target gene links
biosample_term_name!
amniotic stem cell
Showing 5 of 5 results
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Download
FileSet
DSR709JRG
released
Annotation file set
: Candidate regulatory elements for BSS01867 umbilical cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR045ROH
released
Annotation file set
: Chromatin states for BSS01867 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR470LKX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE umbilical cord
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR679FBZ
released
Annotation file set
: Histone modifications annotation for Placenta Umbilical_Cord from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR434KWI
released
Annotation file set
: Accessible chromatin annotation for Placenta Umbilical Cord from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP