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Citing CMDGA
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Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
45
placenta
18
trophoblast cell
12
chorionic villus
10
chorion membrane
5
fibroblast of villous mesenchyme
4
umbilical cord
3
HTR-8/Svneo
3
amnion
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
epithelial cell of amnion
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
trophoblast giant cell
Organ
4
extraembryonic component
Life stage
3
embryonic
Date released
3
September, 2022
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR709JRG
released
Annotation file set
: Candidate regulatory elements for BSS01867 umbilical cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR561DSE
released
Annotation file set
: Target gene predictions for BSS01867 umbilical cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR045ROH
released
Annotation file set
: Chromatin states for BSS01867 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR434KWI
released
Annotation file set
: Accessible chromatin annotation for Placenta Umbilical Cord from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP