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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
31
placenta
11
trophoblast cell
8
chorionic villus
6
fibroblast of villous mesenchyme
4
chorion membrane
4
umbilical cord
2
amnion
2
chorion
1
HTR-8/Svneo
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
epithelial cell of amnion
Organ
4
extraembryonic component
Life stage
2
embryonic
Date released
2
February, 2021
1
June, 2020
1
September, 2022
Software used
2
macs
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
software_used.software.name!
r
Showing 4 of 4 results
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Download
FileSet
DSR045ROH
released
Annotation file set
: Chromatin states for BSS01867 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR470LKX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE umbilical cord
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR679FBZ
released
Annotation file set
: Histone modifications annotation for Placenta Umbilical_Cord from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR434KWI
released
Annotation file set
: Accessible chromatin annotation for Placenta Umbilical Cord from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP