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Schema
Citing CMDGA
Clear Filters
Annotation type
37
candidate regulatory elements
24
accessible chromatin
11
binding sites
11
histone modifications
5
target gene predictions
4
gene expression
1
chromatin state
1
eQTL
Annotation Category
5
Target gene links
Annotation type Category
3
ATAC-seq
3
DNase-seq
3
H3K27ac ChIP-Seq
1
pCHi-C
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
1
tissue
Biosample term
2
megakaryocyte
2
trophoblast cell
1
placenta
Organ
73
epithelium
57
embryo
54
uterus
38
connective tissue
32
blood
32
bodily fluid
30
pancreas
18
intestine
16
brain
13
heart
12
musculature of body
11
large intestine
10
pituitary gland
10
skin of body
8
lung
7
adrenal gland
7
liver
7
stomach
7
vasculature
6
blood vessel
5
adipose tissue
5
mammary gland
4
small intestine
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
prostate gland
2
spleen
2
thyroid gland
2
vein
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
lymphoid tissue
1
penis
1
placenta
1
spinal cord
1
urinary bladder
Date released
September, 2022
3
May, 2021
1
January, 2021
1
May, 2020
Software used
3
abc
1
chicago
1
cicero
Lab
3
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
4
AMP
1
T1D
RFA
4
AMP
1
T1D
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
DSR630TXR
released
Annotation file set
: enhancer-gene predicton of trophoblast_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR831KJP
released
Annotation file set
: enhancer-gene predicton of placenta-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP