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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
60
placenta
23
trophoblast cell
16
chorionic villus
10
chorion membrane
8
fibroblast of villous mesenchyme
7
MG63
6
OCI-LY1
6
SJSA1
6
umbilical cord
5
L1-S8
5
OCI-LY3
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8R
4
NCI-H929
4
U2OS
4
amnion
4
bone tissue
4
femur
4
megakaryocyte
4
stromal cell of bone marrow
3
HTR-8/Svneo
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
arm bone
3
epithelial cell of amnion
3
leg bone
3
mononuclear cell of bone marrow
2
chorion
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
amniotic epithelial cell
1
bone cell
1
bone marrow cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
distal epiphysis of tibia
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
trophoblast giant cell
Disease term
3
large-cell immunoblastic lymphoma
Organ
5
bone element
0
extraembryonic component
Life stage
4
adult
Date released
3
September, 2022
2
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
distal epiphysis of tibia
Showing 5 of 5 results
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Download
FileSet
DSR050JCW
released
Annotation file set
: Candidate regulatory elements for BSS01390 OCI-LY3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR024ZCA
released
Annotation file set
: Target gene predictions for BSS01390 OCI-LY3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267BLF
released
Annotation file set
: Chromatin states for BSS01390 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR216YMC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE OCI-LY3
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR396PFI
released
Annotation file set
: Binding sites annotation for Blood OCI-LY-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP