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Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
7
target gene predictions
5
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
7
Target gene links
1
cis-regulatory elements
Annotation type Category
8
DNase-seq
5
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
6
primary cell
2
in vitro differentiated cells
Biosample term
16
placenta
8
trophoblast cell
4
chorion membrane
4
chorionic villus
4
megakaryocyte
2
L1-S8
2
L1-S8R
2
MG63
2
SJSA1
2
fibroblast of villous mesenchyme
2
umbilical cord
1
HS-27A
1
HS-5
1
HTR-8/Svneo
1
KMS-11
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
U2OS
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
epithelial cell of amnion
1
femur
1
leg bone
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
stromal cell of bone marrow
1
trophoblast giant cell
Organ
8
embryo
8
extraembryonic component
0
bone element
Life stage
5
embryonic
Date released
5
September, 2022
2
May, 2021
1
June, 2020
Software used
5
r
2
abc
1
macs
Lab
6
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
Showing 8 of 8 results
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Download
FileSet
DSR046UMD
released
Annotation file set
: Target gene predictions for BSS01857 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493RDI
released
Annotation file set
: Target gene predictions for BSS01856 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR220SQZ
released
Annotation file set
: Target gene predictions for BSS01855 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR277VMW
released
Annotation file set
: Target gene predictions for BSS01853 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838IWD
released
Annotation file set
: Target gene predictions for BSS01852 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR630TXR
released
Annotation file set
: enhancer-gene predicton of trophoblast_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR171SFZ
released
Annotation file set
: Accessible chromatin annotation for Placenta Trophoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP