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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
37
retina
21
MCF-7
20
pigmented layer of retina
15
retinal pigment epithelial cell
13
mammary gland epithelial cell
9
mammary epithelial cell
7
WERI-Rb-1
7
eye
7
fibroblast of mammary gland
6
luminal epithelial cell of mammary gland
6
myoepithelial cell of mammary gland
5
T47D
4
fibroblast of the conjunctiva
4
iris pigment epithelial cell
3
MCF 10A
2
Muller cell
2
mammary gland
1
retinal pigment epithelial cell
1
corneal epithelium
1
retinal bipolar neuron
1
retinal cell
Organ
4
connective tissue
4
eye
0
mammary gland
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
encode-ccres
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
chromatin state
Showing 4 of 4 results
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Download
FileSet
DSR132SMN
released
Annotation file set
: Candidate regulatory elements for BSS00349 fibroblast of the conjunctiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR811DGR
released
Annotation file set
: Target gene predictions for BSS00349 fibroblast of the conjunctiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758XPL
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the conjunctiva
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR782AET
released
Annotation file set
: Accessible chromatin annotation for Others HConF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP