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Schema
Citing CMDGA
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Annotation type
5
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ATAC-seq
1
DNase-seq
Available data
9
bed bed3+
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
primary cell
Biosample term
7
pigmented layer of retina
7
retina
5
retinal pigment epithelial cell
1
WERI-Rb-1
1
eye
1
fibroblast of the conjunctiva
1
iris pigment epithelial cell
Organ
5
epithelium
5
eye
Date released
4
November, 2022
1
June, 2020
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
bigWig
Showing 5 of 5 results
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FileSet
DSR141IRH
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using viral (IMR90.4) ctrl
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR332MGG
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) overexpression of HDAC11
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR011XGG
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) empty
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497CTZ
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) ctrl
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR574YGM
released
Annotation file set
: Accessible chromatin annotation for Neural HRPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP