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Citing CMDGA
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Annotation type
3
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
16
retina
11
pigmented layer of retina
3
retinal pigment epithelial cell
2
Muller cell
1
WERI-Rb-1
1
eye
1
fibroblast of the conjunctiva
1
iris pigment epithelial cell
1
retinal bipolar neuron
Organ
3
epithelium
3
eye
Date released
November, 2022
1
January, 2020
1
June, 2020
1
November, 2021
Software used
3
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
month_released!
November, 2022
Showing 3 of 3 results
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Download
FileSet
DSR760OPB
released
Annotation file set
: Accessible chromatin annotation of Fetal Retinal Pigment Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR574YGM
released
Annotation file set
: Accessible chromatin annotation for Neural HRPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR296CDQ
released
Annotation file set
: Accessible chromatin annotation of retinal pigment epithelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP