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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
15
ovary
15
testis
5
NT2-D1 cell
1
Leydig cell
1
NT2/D1
1
luteal cell
1
somatic gonadal cell
Disease term
2
testicular embryonal carcinoma
Organ
5
gonad
5
testis
Life stage
2
unknown
Date released
2
September, 2022
1
February, 2021
1
June, 2020
1
October, 2022
Software used
2
chromhmm
2
macs
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
target gene predictions
Showing 5 of 5 results
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Download
FileSet
DSR209NBR
released
Annotation file set
: Binding sites annotation for NT2-D1 cell (NT2-D1) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR464YWC
released
Annotation file set
: Candidate regulatory elements for BSS01386 NT2-D1 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549AED
released
Annotation file set
: Chromatin states for BSS01386 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR556ACO
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815ZSB
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP