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Schema
Citing CMDGA
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Annotation type
13
gene expression
9
accessible chromatin
5
candidate regulatory elements
5
histone modifications
5
target gene predictions
3
chromatin state
2
binding sites
2
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
4
hepatocyte
3
keratinocyte
2
pancreatic ductal cell
2
tracheal epithelial cell
1
aortic endothelial cell
1
bronchial epithelial cell
1
choroid plexus epithelial cell
1
corneal epithelium
1
dermis lymphatic vessel endothelial cell
1
endothelial cell
1
epithelial cell of prostate
1
foreskin keratinocyte
1
intestinal epithelial cell
1
intestinal epithelium
1
kidney epithelium
1
mammary gland epithelial cell
1
meso-epithelial cell
1
pancreatic acinar cell
1
pulmonary artery endothelial cell
1
retinal pigment epithelial cell
1
testis
1
vein endothelial cell
Organ
5
epithelium
4
liver
1
artery
1
blood vessel
1
vasculature
0
gonad
Date released
3
August, 2021
2
February, 2021
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR954EQS
released
Annotation file set
: Histone modifications annotation of H3K4me3 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR931ARL
released
Annotation file set
: Histone modifications annotation of H3K4me1 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR523PSZ
released
Annotation file set
: Histone modifications annotation of H3K27ac ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR272SHL
released
Annotation file set
: Histone modifications annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR220BBP
released
Annotation file set
: Histone modifications annotation for Cardiovascular Large_pulmonary_artery_endothelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP