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Citing CMDGA
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Annotation type
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
24
stomach
7
ovary
4
testis
2
NT2-D1 cell
2
foveolar cell of stomach
2
luteal cell
2
parietal cell
2
peptic cell
2
stomach neuroendocrine cell
2
stomach smooth muscle
1
gastric (mucosa of stomach)
1
gastric goblet cell
1
gastroesophageal sphincter
1
mucosa of stomach
1
somatic gonadal cell
Disease term
1
testicular embryonal carcinoma
Organ
2
gonad
2
testis
0
stomach
Life stage
1
unknown
Date released
1
June, 2020
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR598KKZ
released
Annotation file set
: Target gene predictions for BSS01386 NT2-D1 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815ZSB
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP