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Citing CMDGA
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Annotation type
3
chromatin state
3
target gene predictions
2
candidate regulatory elements
1
accessible chromatin
1
gene expression
Annotation Category
3
Target gene links
Annotation type Category
1
ATAC-seq
1
ChIP-seq
1
DNase-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
20
heart
7
heart left ventricle
5
heart right ventricle
4
fibroblast of cardiac tissue
3
coronary artery
2
right atrium auricular region
2
right cardiac atrium
1
cardiac endothelial cell
1
cardiac ventricle
1
endocardial cell
1
left cardiac atrium
1
smooth muscle cell of the coronary artery
1
ventricular cardiac muscle cell
Organ
3
heart
1
epithelium
Life stage
1
adult
Date released
1
March, 2020
1
November, 2021
1
September, 2022
Software used
1
abc
1
nospecificsoft_customcode
1
r
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR180QUY
released
Annotation file set
: Target gene predictions for BSS01508 right cardiac atrium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR342UQG
released
Annotation file set
: Target gene predictions of Endothelial Cell (Myocardial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR958TQK
released
Annotation file set
: A target gene prediction annotation in Human Right Atrium of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP