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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
1
gene expression
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
1
Target gene links
Annotation type Category
2
snATAC-seq
1
ATAC-seq
1
scRNA-seq
Available data
3
bed bed3+
2
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
90
heart
34
heart left ventricle
21
coronary artery
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
12
left cardiac atrium
8
right cardiac atrium
7
smooth muscle cell of the coronary artery
5
left ventricle myocardium
4
cardiac fibroblast
3
endocardial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
ventricular cardiac muscle cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
fetal heart
1
mitral valve
1
pulmonary valve
1
tricuspid valve
Organ
4
heart
3
epithelium
Life stage
1
embryonic
Date released
3
November, 2021
1
August, 2021
Software used
2
macs
1
abc
1
r
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
Project
3
ENCODE
1
AMP
RFA
3
ENCODE3
1
AMP
Showing 4 of 4 results
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FileSet
DSR291BPF
released
Annotation file set
: Target gene predictions of Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR347CWT
released
Annotation file set
: Accessible chromatin annotation of Fetal Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR978SWA
released
Annotation file set
: Accessible chromatin annotation of Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR247BCI
released
Annotation file set
: Gene expression annotation of aortic valve from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP