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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
binding sites
1
gene expression
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
1
Target gene links
Annotation type Category
2
snATAC-seq
1
ATAC-seq
1
ChIP-seq
1
RNA-seq
Available data
4
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
90
heart
34
heart left ventricle
21
coronary artery
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
12
left cardiac atrium
8
right cardiac atrium
7
smooth muscle cell of the coronary artery
5
left ventricle myocardium
4
cardiac fibroblast
3
endocardial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
ventricular cardiac muscle cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
fetal heart
1
mitral valve
1
pulmonary valve
1
tricuspid valve
Organ
5
epithelium
5
heart
2
artery
2
blood vessel
2
vasculature
Life stage
1
adult
Date released
3
November, 2021
1
February, 2020
1
February, 2021
Software used
3
macs
1
abc
1
r
Lab
3
Bing Ren, UCSD
2
AMP-T2D consortium
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
Showing 5 of 5 results
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Download
FileSet
DSR291BPF
released
Annotation file set
: Target gene predictions of Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR347CWT
released
Annotation file set
: Accessible chromatin annotation of Fetal Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR978SWA
released
Annotation file set
: Accessible chromatin annotation of Endocardial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR352ERF
released
Annotation file set
: Binding sites annotation for Cardiovascular Coronary_artery_endothelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR539DEL
released
Annotation file set
: Gene expression levels of Coronary artery endothelial cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP