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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
5
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
90
heart
73
brain
34
heart left ventricle
22
caudate nucleus
21
coronary artery
19
heart right ventricle
19
right atrium auricular region
18
substantia nigra
17
fibroblast of cardiac tissue
16
cerebellum
16
frontal cortex
16
layer of hippocampus
15
putamen
14
temporal lobe
12
Ammon's horn
12
left cardiac atrium
10
SK-N-DZ
10
SK-N-SH
10
angular gyrus
10
choroid plexus epithelial cell
10
pituitary stalk
9
cingulate gyrus
8
SK-N-MC
8
globus pallidus
8
midbrain
8
right cardiac atrium
7
BE(2)-C
7
amygdala
7
hypothalamus
7
nucleus accumbens
7
smooth muscle cell of the coronary artery
6
Brodmann (1909) area 46
6
Daoy
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cerebellum (Hemisphere)
6
medulla oblongata
6
middle frontal gyrus
6
pons
5
cardiac fibroblast
5
A172
5
M059J
5
brain microvascular endothelial cell
5
cardiac fibroblast
5
cerebellar cortex
5
left ventricle myocardium
4
H54
4
U-87 MG
4
brain pericyte
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
inferior parietal cortex
4
medulloblastoma
3
dorsolateral prefrontal cortex
3
endocardial cell
3
prefrontal cortex
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
hippocampal neuron
2
middle frontal area 46
2
pituitary gland
2
ventricular cardiac muscle cell
1
brain microvascular endothelial cell
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
anterior parahippocampal gyrus
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
cerebellar hemisphere
1
claustrum of brain
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
fetal heart
1
frontal pole
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
mid-frontal lobe
1
mitral valve
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
pulmonary valve
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
tricuspid valve
1
undifferentiated ESC (H9 cell line)
Organ
5
brain
5
connective tissue
5
vasculature
0
heart
Life stage
2
adult
1
fetal
1
unknown
Date released
3
January, 2020
2
May, 2020
Software used
3
macs
2
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR631MKV
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR529VUE
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast adult DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR353QAR
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR663NVC
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608VUV
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast unknow from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP