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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
90
heart
40
retina
34
heart left ventricle
21
coronary artery
21
ovary
20
pigmented layer of retina
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
16
retinal pigment epithelial cell
12
left cardiac atrium
9
eye
8
WERI-Rb-1
8
right cardiac atrium
7
smooth muscle cell of the coronary artery
5
fibroblast of the conjunctiva
5
iris pigment epithelial cell
5
left ventricle myocardium
4
cardiac fibroblast
3
endocardial cell
2
Muller cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
luteal cell
2
ventricular cardiac muscle cell
1
retinal pigment epithelial cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
corneal epithelium
1
fetal heart
1
mitral valve
1
pulmonary valve
1
retinal bipolar neuron
1
retinal cell
1
tricuspid valve
Organ
5
epithelium
5
eye
0
heart
0
ovary
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR741HXN
released
Annotation file set
: Candidate regulatory elements for BSS00743 iris pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR523WGB
released
Annotation file set
: Target gene predictions for BSS00743 iris pigment epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR302XLF
released
Annotation file set
: Chromatin states for BSS00743 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR858CLJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iris pigment epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR950BXJ
released
Annotation file set
: Accessible chromatin annotation for Others HIPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP