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Schema
Citing CMDGA
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Annotation type
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
58
heart
19
heart left ventricle
14
MCF-7
11
heart right ventricle
8
left cardiac atrium
6
coronary artery
6
fibroblast of cardiac tissue
6
mammary gland epithelial cell
6
myoepithelial cell of mammary gland
5
T47D
5
right atrium auricular region
5
right cardiac atrium
4
mammary epithelial cell
3
MCF 10A
3
cardiac fibroblast
3
fibroblast of mammary gland
2
luminal epithelial cell of mammary gland
Organ
3
connective tissue
3
mammary gland
0
heart
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR025HFM
released
Annotation file set
: Candidate regulatory elements for BSS00343 fibroblast of mammary gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR848OMG
released
Annotation file set
: Chromatin states for BSS00343 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR349CZE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of mammary gland
Lab:
AMP-T2D consortium
Project:
AMP