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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
5
target gene predictions
1
accessible chromatin
Annotation Category
5
Target gene links
1
cis-regulatory elements
Annotation type Category
6
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
4
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
18
small intestine
16
large intestine
8
sigmoid colon
7
colon epithelial cell
6
enterocyte
6
transverse colon
5
HT-29
4
HCT-116 cell
4
Peyer's patch
4
SW480
4
colonic mucosa
4
enteric smooth muscle cell
3
HCT116
3
RKO
3
duodenal mucosa
3
mucosa of rectum
2
enterocyte of epithelium of small intestine
2
muscle layer of colon
2
muscle layer of duodenum
2
paneth cell
2
rectum smooth muscle tissue
2
small intestine goblet cell
1
Crypt of Lieberkuhn
1
colon
1
crypt of Lieberkuhn
1
intestinal epithelial cell
1
intestinal epithelium
Organ
6
intestine
6
large intestine
Life stage
4
adult
Date released
4
September, 2022
1
June, 2020
1
May, 2021
Software used
4
r
1
abc
1
macs
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
annotation_type!
candidate regulatory elements
Showing 6 of 6 results
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Download
FileSet
DSR372VZM
released
Annotation file set
: Target gene predictions for BSS01851 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR538EBT
released
Annotation file set
: Target gene predictions for BSS01850 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684ITQ
released
Annotation file set
: Target gene predictions for BSS01849 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195DNM
released
Annotation file set
: Target gene predictions for BSS01848 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR692JFQ
released
Annotation file set
: enhancer-gene predicton of transverse_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR464RYV
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Colon, Transverse from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP