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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
16
small intestine
13
large intestine
7
colon epithelial cell
5
ovary
5
sigmoid colon
5
transverse colon
4
enteric smooth muscle cell
4
testis
3
HCT116
3
Peyer's patch
3
enterocyte
2
colonic mucosa
2
duodenal mucosa
2
enterocyte of epithelium of small intestine
2
luteal cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
paneth cell
2
small intestine goblet cell
1
HT-29
1
Leydig cell
1
NT2-D1 cell
1
SW480
1
colon sigmoid
1
rectum smooth muscle tissue
Organ
2
connective tissue
2
gonad
2
ovary
0
intestine
Date released
2
November, 2021
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
Showing 2 of 2 results
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Download
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR562HUD
released
Annotation file set
: Accessible chromatin annotation of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE