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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
target gene predictions
4
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
3
tissue
1
cell line
Biosample term
15
small intestine
13
large intestine
5
sigmoid colon
4
transverse colon
3
Peyer's patch
3
colonic mucosa
3
duodenal mucosa
3
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
rectum smooth muscle tissue
1
HCT116
1
HT-29
1
SW480
1
colon epithelial cell
Disease term
1
colorectal adenocarcinoma
Organ
4
intestine
4
large intestine
Life stage
3
adult
Date released
3
September, 2022
1
August, 2017
Software used
4
chromhmm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR815ZTC
released
Annotation file set
: Chromatin states for BSS00492 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180ELA
released
Annotation file set
: Chromatin states for BSS01283 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR346ASL
released
Annotation file set
: Chromatin states for BSS01282 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR362251
released
Annotation file set
: ChromHMM 13-state model for Rectal mucosa
Lab:
Stephen Parker, UMich
Project:
AMP