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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
Annotation Category
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
46
small intestine
42
large intestine
17
sigmoid colon
14
transverse colon
11
Peyer's patch
6
colonic mucosa
6
duodenal mucosa
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
5
HT-29
4
SW480
3
HCT116
2
HCT-116 cell
2
RKO
2
colon epithelial cell
2
rectum smooth muscle tissue
1
Caco-2
1
LoVo
1
crypt of Lieberkuhn
1
rectal smooth muscle tissue
Organ
2
intestine
2
large intestine
Life stage
1
unknown
Date released
1
February, 2021
1
June, 2020
Software used
1
encode-ccres
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR837ODF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RKO
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR501BQN
released
Annotation file set
: Accessible chromatin annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP