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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
target gene predictions
2
chromatin state
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
29
small intestine
27
large intestine
10
sigmoid colon
8
transverse colon
7
Peyer's patch
4
colonic mucosa
4
duodenal mucosa
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
2
HCT116
2
HT-29
2
SW480
1
Caco-2
1
LoVo
1
RKO
1
colon epithelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Disease term
2
colorectal adenocarcinoma
Organ
4
intestine
4
large intestine
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR211KZE
released
Annotation file set
: Candidate regulatory elements for BSS01682 SW480 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR756UQP
released
Annotation file set
: Candidate regulatory elements for BSS00492 HCT116 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR047FTW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE SW480
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR730OKU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HCT116
Lab:
AMP-T2D consortium
Project:
AMP