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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
17
small intestine
15
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
HT-29
3
Peyer's patch
3
colonic mucosa
2
SW480
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
Crypt of Lieberkuhn
1
HCT-116 cell
1
RKO
1
enterocyte of epithelium of small intestine
1
intestinal epithelial cell
1
intestinal epithelium
1
paneth cell
1
rectum smooth muscle tissue
1
small intestine goblet cell
Disease term
1
colorectal adenocarcinoma
Organ
2
intestine
2
large intestine
Life stage
1
adult
Date released
1
February, 2021
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR610XEI
released
Annotation file set
: Target gene predictions for BSS01682 SW480 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480BBB
released
Annotation file set
: Histone modifications annotation for Digestive tract SW_480 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP