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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
56
large intestine
55
small intestine
9
colon epithelial cell
7
sigmoid colon
6
enterocyte
4
HCT-116 cell
4
HT-29
4
RKO
4
enteric smooth muscle cell
3
SW480
3
transverse colon
2
HCT116
2
colonic mucosa
2
enterocyte of epithelium of small intestine
2
paneth cell
2
small intestine goblet cell
1
Crypt of Lieberkuhn
1
Peyer's patch
1
colon
1
colon sigmoid
1
crypt of Lieberkuhn
1
duodenal mucosa
1
intestinal epithelial cell
1
intestinal epithelium
1
mucosa of rectum
1
rectum smooth muscle tissue
Organ
3
intestine
3
large intestine
Life stage
adult
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
adult
Showing 3 of 3 results
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Download
FileSet
DSR480BBB
released
Annotation file set
: Histone modifications annotation for Digestive tract SW_480 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR783QVF
released
Annotation file set
: Binding sites annotation for Digestive tract SW_480 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR118XAD
released
Annotation file set
: Accessible chromatin annotation for Digestive tract SW 480 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP