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Citing CMDGA
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Annotation type
30
candidate regulatory elements
21
target gene predictions
16
chromatin state
4
accessible chromatin
1
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
snATAC-seq
1
DNase-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
3
colon epithelial cell
3
enterocyte
2
enteric smooth muscle cell
1
HCT-116 cell
1
HT-29
1
Peyer's patch
1
RKO
1
SW480
1
crypt of Lieberkuhn
1
enterocyte of epithelium of small intestine
1
large intestine
1
paneth cell
1
sigmoid colon
1
small intestine
1
small intestine goblet cell
1
transverse colon
Organ
4
intestine
3
epithelium
3
large intestine
1
small intestine
Date released
3
November, 2021
1
June, 2020
Software used
4
macs
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
Project
3
ENCODE
1
AMP
RFA
3
ENCODE3
1
AMP
Showing 4 of 4 results
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Download
FileSet
DSR609IPL
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR419PGV
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR903BJH
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR074FIF
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Intestine, Small from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP