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Citing CMDGA
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Annotation type
9
candidate regulatory elements
6
chromatin state
6
target gene predictions
1
accessible chromatin
1
eQTL
Annotation Category
6
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
17
small intestine
14
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
Peyer's patch
2
HT-29
2
colonic mucosa
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
HCT-116 cell
1
SW480
1
enterocyte of epithelium of small intestine
1
paneth cell
1
rectum smooth muscle tissue
1
small intestine goblet cell
Organ
6
intestine
6
large intestine
1
musculature of body
Life stage
5
adult
Date released
5
September, 2022
1
May, 2021
Software used
5
r
1
abc
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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FileSet
DSR372VZM
released
Annotation file set
: Target gene predictions for BSS01851 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR538EBT
released
Annotation file set
: Target gene predictions for BSS01850 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684ITQ
released
Annotation file set
: Target gene predictions for BSS01849 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195DNM
released
Annotation file set
: Target gene predictions for BSS01848 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR055KZV
released
Annotation file set
: Target gene predictions for BSS01475 rectum smooth muscle tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR692JFQ
released
Annotation file set
: enhancer-gene predicton of transverse_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP