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Annotation type
4
chromatin state
1
eQTL
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
1
RNA-seq
Available data
bed bed3+
4
bed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
16
small intestine
13
large intestine
5
sigmoid colon
5
transverse colon
3
Peyer's patch
2
colonic mucosa
2
duodenal mucosa
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
HCT116
1
HT-29
1
SW480
1
colon - sigmoid
1
colon - transverse
1
colon epithelial cell
1
colon sigmoid
1
rectum smooth muscle tissue
1
small intestine - terminal Ileum
Organ
5
intestine
5
large intestine
Life stage
4
adult
Date released
4
September, 2022
1
January, 2022
Software used
4
chromhmm
1
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
bed bed3+
Showing 5 of 5 results
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FileSet
DSR160UQZ
released
Annotation file set
: Chromatin states for BSS01851 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR172AJC
released
Annotation file set
: Chromatin states for BSS01850 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096PNG
released
Annotation file set
: Chromatin states for BSS01849 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286PKV
released
Annotation file set
: Chromatin states for BSS01848 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR899VFT
released
Annotation file set
: colon transverse eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP