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Citing CMDGA
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Annotation type
7
candidate regulatory elements
4
target gene predictions
3
chromatin state
2
accessible chromatin
Annotation Category
4
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
17
small intestine
14
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
Peyer's patch
2
HT-29
2
colonic mucosa
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
HCT-116 cell
1
SW480
1
enterocyte of epithelium of small intestine
1
paneth cell
1
rectum smooth muscle tissue
1
small intestine goblet cell
Organ
4
intestine
3
lymphoid tissue
1
epithelium
1
small intestine
Life stage
3
adult
Date released
3
September, 2022
1
November, 2021
Software used
3
r
1
abc
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
organ_slims!
pericardium
Showing 4 of 4 results
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Download
FileSet
DSR116WBY
released
Annotation file set
: Target gene predictions for BSS01428 Peyer's patch from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684TVX
released
Annotation file set
: Target gene predictions for BSS01427 Peyer's patch from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR376YAP
released
Annotation file set
: Target gene predictions for BSS01426 Peyer's patch from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802OCO
released
Annotation file set
: Target gene predictions of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE