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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
63
small intestine
56
large intestine
23
sigmoid colon
21
coronary artery
20
endothelial cell of umbilical vein
19
tibial artery
19
transverse colon
16
ascending aorta
14
Peyer's patch
14
endothelial cell of hepatic sinusoid
13
aorta
11
thoracic aorta
10
colonic mucosa
10
dermis blood vessel endothelial cell
9
duodenal mucosa
9
mucosa of rectum
8
HT-29
8
fibroblast of pulmonary artery
8
muscle layer of colon
8
muscle layer of duodenum
7
SW480
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
HCT116
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
4
HCT-116 cell
4
RKO
4
aortic endothelial cell
4
pancreatic endothelial cell
4
rectum smooth muscle tissue
3
colon epithelial cell
3
enterocyte
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
vein endothelial cell
1
brain microvascular endothelial cell
1
Caco-2
1
Crypt of Lieberkuhn
1
LoVo
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
circle of Willis
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
crypt of Lieberkuhn
1
intestinal epithelial cell
1
intestinal epithelium
1
rectal smooth muscle tissue
1
small intestine - terminal Ileum
1
whole blood
Organ
4
intestine
4
large intestine
0
blood vessel
Life stage
1
unknown
Date released
3
February, 2021
1
June, 2020
Software used
3
macs
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
award.project!
ENCODE
Showing 4 of 4 results
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Download
FileSet
DSR837ODF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RKO
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823SVP
released
Annotation file set
: Histone modifications annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR612HZP
released
Annotation file set
: Binding sites annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR501BQN
released
Annotation file set
: Accessible chromatin annotation for Digestive tract RKO from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP