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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
1
bigBed bed9
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
15
small intestine
13
large intestine
5
endothelial cell of umbilical vein
5
sigmoid colon
4
aorta
4
transverse colon
3
Peyer's patch
3
ascending aorta
3
colonic mucosa
3
coronary artery
3
duodenal mucosa
3
mucosa of rectum
3
thoracic aorta
3
tibial artery
2
dermis blood vessel endothelial cell
2
muscle layer of colon
2
muscle layer of duodenum
2
rectum smooth muscle tissue
1
HCT116
1
HT-29
1
SW480
1
brain microvascular endothelial cell
1
colon epithelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
pulmonary artery endothelial cell
Organ
3
artery
3
blood vessel
3
heart
3
vasculature
0
intestine
Life stage
3
adult
Date released
2
September, 2022
1
May, 2019
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR823JJW
released
Annotation file set
: Chromatin states for BSS00243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR679HDX
released
Annotation file set
: Chromatin states for BSS00242 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR716IKT
released
Annotation file set
: ChromHMM 4-state model for coronary artery from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP