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Schema
Citing CMDGA
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Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
23
K562
17
small intestine
14
large intestine
8
GM12878
7
sigmoid colon
5
transverse colon
4
aorta
4
colon epithelial cell
4
endothelial cell of umbilical vein
3
HCT116
3
Peyer's patch
3
coronary artery
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
HT-29
2
NAMALWA cell
2
OCI-LY7
2
ascending aorta
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
thoracic aorta
2
tibial artery
1
CMK
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM18505
1
GM19099
1
GM19193
1
HCT-116 cell
1
HL-60
1
KBM-7
1
NB4
1
RPMI8226
1
SW480
1
brain microvascular endothelial cell
1
enterocyte of epithelium of small intestine
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
paneth cell
1
pulmonary artery endothelial cell
1
rectum smooth muscle tissue
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
Organ
3
artery
3
blood vessel
3
heart
3
vasculature
0
blood
0
intestine
Life stage
2
adult
Date released
2
September, 2022
1
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP