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Citing CMDGA
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Annotation type
4
target gene predictions
3
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
5
heart
4
fibroblast of cardiac tissue
3
colon epithelial cell
3
coronary artery
3
enterocyte
3
heart left ventricle
3
right atrium auricular region
2
endocardial cell
2
enteric smooth muscle cell
1
HCT-116 cell
1
HT-29
1
Peyer's patch
1
RKO
1
SW480
1
cardiac endothelial cell
1
crypt of Lieberkuhn
1
enterocyte of epithelium of small intestine
1
fetal heart
1
heart right ventricle
1
large intestine
1
left cardiac atrium
1
paneth cell
1
sigmoid colon
1
small intestine
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
transverse colon
1
ventricular cardiac muscle cell
Organ
3
epithelium
3
intestine
3
large intestine
0
heart
Date released
3
November, 2021
Software used
3
macs
Lab
3
Bing Ren, UCSD
Project
3
ENCODE
RFA
3
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR609IPL
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR419PGV
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR903BJH
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE