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Schema
Citing CMDGA
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Annotation type
4
accessible chromatin
3
variant allelic effects
1
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
5
heart
4
fibroblast of cardiac tissue
3
colon epithelial cell
3
coronary artery
3
enterocyte
3
heart left ventricle
3
right atrium auricular region
2
endocardial cell
2
enteric smooth muscle cell
1
HCT-116 cell
1
HT-29
1
Peyer's patch
1
RKO
1
SW480
1
cardiac endothelial cell
1
crypt of Lieberkuhn
1
enterocyte of epithelium of small intestine
1
fetal heart
1
heart right ventricle
1
large intestine
1
left cardiac atrium
1
paneth cell
1
sigmoid colon
1
small intestine
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
transverse colon
1
ventricular cardiac muscle cell
Organ
4
epithelium
3
intestine
1
heart
Date released
4
November, 2021
Software used
4
macs
Lab
4
Bing Ren, UCSD
Project
4
ENCODE
RFA
4
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR989BFJ
released
Annotation file set
: Accessible chromatin annotation of Fetal Enterocyte 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR315JBQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Enterocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR510QEM
released
Annotation file set
: Accessible chromatin annotation of Fetal Enterocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR796CHH
released
Annotation file set
: Accessible chromatin annotation of Endothelial Cell (Myocardial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE