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Schema
Citing CMDGA
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Annotation type
7
candidate regulatory elements
4
binding sites
3
target gene predictions
2
chromatin state
2
histone modifications
1
accessible chromatin
Annotation Category
3
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
17
small intestine
14
large intestine
7
sigmoid colon
5
keratinocyte
5
transverse colon
4
colon epithelial cell
4
fibroblast of dermis
4
foreskin keratinocyte
3
HCT116
3
Peyer's patch
3
foreskin fibroblast
3
skin fibroblast
2
HT-29
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
enteric smooth muscle cell
2
iPS DF 19.11
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
COLO829
1
GM23248
1
HCT-116 cell
1
RPMI7951
1
SK-MEL-5
1
SW480
1
basal cell of epidermis
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
fibroblast of arm
1
granular cell of epidermis
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
paneth cell
1
rectum smooth muscle tissue
1
skin of body
1
small intestine goblet cell
Organ
3
connective tissue
3
penis
3
skin of body
0
intestine
Life stage
2
newborn
Date released
2
September, 2022
1
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR923ELC
released
Annotation file set
: Target gene predictions for BSS00697 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR058XGD
released
Annotation file set
: Target gene predictions for BSS00353 foreskin fibroblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR506HNX
released
Annotation file set
: enhancer-gene predicton of foreskin_fibroblast-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP